Question 1:
Candidate Choice, Absentee Mail, Early Voting, Election Day, Total Votes TODD RUSS, 7,021, 8,194, 135,216, 150,431 CLARK JOLLEY, 7,012, 5,835, 107,714, 120,561
“find –> replace –> ,”
Question 2:
Emily Adamic (ema3896@utulsa.edu) Emily Bierbaum (elb0588@utulsa.edu) Laci Cartmell (ljc454@utulsa.edu) Elise Delaporte (eld0070@utulsa.edu) Rebekah Hansen (reh9623@utulsa.edu) Madison Herrboldt (mah1626@utulsa.edu) Cari Lewis (cdl5261@utulsa.edu) Tanner Mierow (ttm5619@utulsa.edu) Daniel Naranjo (dsn8679@utulsa.edu) Caleb Paslay (cap1050@utulsa.edu) Olivia Pletcher (omp9336@utulsa.edu) Amy West (acw1471@utulsa.edu)
Find: (+), (+) (). Replace: \2 \1
Find: (+), (+) Replace: \2 \1
Find: (@.) Replace:(\1)
Question 3:
Banded sculpin, 5 Redspot chub, 5 Northern hog sucker, 6 Creek chub, 8 Stippled darter, 9 Smallmouth bass, 10 Logperch, 13 Slender madtom, 14
Find: , Replace: “nothing”
Question 4:
Banded sculpin, C_carolinae, 5 Redspot chub, N_asper, 5 Northern h_sucker, H_nigricans, 6 Creek chub, S_atromaculatus, 8 Stippled darter, E_punctulatum, 9 Smallmouth bass, M_dolomieu, 10 Logperch, P_caprodes, 13 Slender madtom, N_exilis, 14
Find: ()+ () Replace: \1_\2
Question 5:
Banded sculpin, C_car., 5 Redspot chub, N_asp., 5 Northern h_suc., H_nig., 6 Creek chub, S_atr., 8 Stippled darter, E_pun., 9 Smallmouth bass, M_dol., 10 Logperch, P_cap., 13 Slender madtom, N_exi., 14
Find: ()+ ()+ Replace: \1_\2.
Question 6:
The command I used was Grep and I used it to create the headers for the Ladona fulva (dragonfly) proteins Headers: >KAG8212618.1 hypothetical protein J437_LFUL013901 [Ladona fulva] >KAG8212619.1 hypothetical protein J437_LFUL013902 [Ladona fulva] >KAG8212620.1 hypothetical protein J437_LFUL013903 [Ladona fulva] >KAG8212621.1 hypothetical protein J437_LFUL013904 [Ladona fulva] >KAG8212622.1 hypothetical protein J437_LFUL013905 [Ladona fulva] >KAG8212623.1 hypothetical protein J437_LFUL013906 [Ladona fulva] >KAG8212624.1 hypothetical protein J437_LFUL013907 [Ladona fulva] >KAG8212625.1 hypothetical protein J437_LFUL013908, partial [Ladona fulva] >KAG8212626.1 hypothetical protein J437_LFUL013909, partial [Ladona fulva] >KAG8212627.1 hypothetical protein J437_LFUL013910 [Ladona fulva]
Question 7:
The command I used was grep to find the headers and sed to find and add in the sequences Headers: >KAG8212618.1 hypothetical protein J437_LFUL013901 [Ladona fulva] MERLQVENASEWGRRERLESDKQALERENRRLRTELRDLLERIERMDSGVGSVETREKSKDSSSQATRHGHSINSPPFST ASSASSSSSTSSAAATAAAQAEMIKQLQQELAEKTKELEELKIAHSKLKAVVRERSTEAAHGARRAEQYEAEVKRLRVRV DELRKELAAAEEEVDAATNNIRKLKRTNEDLQEQVENMQVQIEHLQSRRDSLLETPMPDLSSSRKEITLPGPMEDHGCDC GMYPHSCCQSIVDHREDADTTDLAVPEGTEGEDLLADGLVNRGNKFSFGVFVLLKLIHQQQHGDPSGLVGGRGLHILALP FDPKTTLHENVKYPQVDDLTELVTLLHLDRLLQAPYHLHLYLVEIMDPSGLWTVPIPCPGANPVPRIACPGRNCPPSGYR PSIPVPGALIPSGARCPGRPTPPGPLN >KAG8212619.1 hypothetical protein J437_LFUL013902 [Ladona fulva] MGQSQSQSSVGDGCEDCYPGGYAGGGGGHGPWQAGYGQGGRLPGSAGVDGVGAGRGTGLGPGGGRGYGPGSPGYGRPGAP GFDDTSGLSQGQQMRPGSLAQRPVTTGVEGPGYMGIPGVPPGRGIGGVGGYGTDGTGTAGGPGYRRPTGVTGIQPGTPGY VGPTGTGYGHQPGAPGYRGPGVAGHGIPTAGGGVTRPGHGGAYPGRPGYVPSTGTQHGGYGQVPSGTGGVTRPHGSSGHL APGEGAGVGPGGMIQPGAGYPTGSGQQLPDGVPSAHGGQHLGPGMIQRPVGTHDYGAPGYGTHIGVGDGRHPGGGRMPIG GVGGRVPSGFGGQTVPQGGQMVPSGHGVPGHGLYGPGTGRGTTGYGTYPGAVPGRGIQDGRLHHVPSGGGAPVGVPGHLG VPGGHAGIPGHTGIQGVHPSGSGVGIPGGQVGVPGHAGVQGAHVPTGYIPGGSGVHGVPGQVGVPGGYHRPGVDGVGAGY PGVHPGTHGVPQGYDRYPSGVTGHGLTAPGGAGQFRGPGGVGLPGHLAPEGIRAPGTGIDGRYPDGGQLRPGQAILGTGL APGHGIGTVQRPDGSLVGVDQYGRPGVTGYPGGQRPGYGIDGQYGPGYYDGQAYPLSRPGTGVGGRVPVGGGPDGGESQA QSSVTQDDKEIKAGASSQGRLGDGKAQAQVSGSYSGTGSFSAQAQTSDNGRSAQSQVTGNKDGGSSSAQGNGGKGQSQAQ VQLSSANGATKAEAQSGGWQYGSNTQVQAGENGGMADAQSSGPGTTSSQAQVGFKPYRANGNVQRTPFRGGGTASAQSSS YSGQSQSQVQGAYRYGVSFTGAAQAGSGTRGSRGIGNNRNGTRFERDDHAALSPDTFKLKPLNNFGDLSTPSQSEGQDGR KVPESQVNQMNGNLGGRHQGGMDNSGIHSSNAGGIHQNGHGSNGHVSNVHGSNAHGSNGHRPNGHGSSAHGSNGHGANEN SHFNGMHVPPSRGQINGQRGQQTHNGHQQYNGNSHGIQSPHSNGHQQVHSLNQNVHAPLQGQETSTEMAGHKTSQHDHSV NGNRQPENEYPRFDNGDSRSQQHGGMQGVDYSRDISQTGGKPAVFKTESPRQSQAVFISPMGNEDVHITQAADGGGIPAH PVYQPGQVVPGSSGYVIPEGFRGRVITDSRSIAGDETIAVASPNNGNSQSQTVVLTPGSGKVNYTRIVRPPPGQPVEPAF QDYGQNQNVDEESEMAMRGDTHNFGSNVYRRGDQHVYVKNKMHTRSGGESSSSNQKVDDYDEEDEDEVEEEEEEDEEEVQ ASSTPLPANTYVSVTNSVSGQLNPQGGGGRLYTNGNVGNRGSEGGKFAHTYYTKSSTCGYFTFSCNVVFGSNGRAKICKP RPPTNPDGSPCCC >KAG8212620.1 hypothetical protein J437_LFUL013903 [Ladona fulva] MTSNSRRVAIISLRDTMSSWRRLHPLQVYDILLELLLALELHEHLILQEYIQLGHVLPELQHVQAPQPVLPVYRHVLQEL LGGLERQPEHLLQTARGEVFRLVFLFQEQHRDMFHNLLYHALFRDHIIHVQEHHVRRVPSAHLEVPFVRQTLMGLFLQHL Q >KAG8212621.1 hypothetical protein J437_LFUL013904 [Ladona fulva] MPPISNADVLRNHAFRQVFESCQGLGAGHHAQMERRQVVADQIQLDNLLPVVSFLLGQLLRPPPVPDAQKIRVAALRHQF R >KAG8212622.1 hypothetical protein J437_LFUL013905 [Ladona fulva] MFHQYPVRVDVDLEARTAIVSPPDNIPGLGKSRTFYDYNTRVIAYKDYRSKQCHLERMSDEEKLPGVEEDSTKQNEEGPE GSEAREAERRLHRQMGLLGPTQHNRNRQKRAPQSKQLNGMRRKPKTLYVTETVLSKYEVLRLAGRRISHFCRGFPATLLV QRPPNPTPKLQSPARIPWLSENELPGEGSTESEEHRLLLEAALVKARLAELELQTLDSSDEESPQDHGKTNKGTFLRALS YLHVPQVALLFQSGLPSLSGEKAYETSMPTLEPRVFLPAPQLTENNPEVISDFSQKESR >KAG8212623.1 hypothetical protein J437_LFUL013906 [Ladona fulva] MQVFITPLHLCIPESSPERSVSEAEHRRSAAEANIASETPPGSNHTSTFHTNGHSSHPFSLESAWTAVATASVPRKASHR KDGEDNGGEECPEELYNLTKLAEVSLAAAAGHVFVPQPIPSSVREESSRDGEEDDDGSRDDDEDYNFSQRSNSPRQRNSA EYHGCPECGKRYSTSSNLARHRQTHRSLADKKARRCPHCDKVYVSMPAFSMHVRTHNQGCKCPFCGKCFSRPWLLQGHIR THTGEKPFRCSVCDKAFADKSNLRAHVQTHSNEKPFVCGRCGKAFALKSYLYKHEESSCMRIHHGGSVKTHDDKDPKISP GKKNSRAGQFGQGEQGRKVEEVTTTTVTVIHSSEFGGCVVSDAGSRSPQSVFPMNGRSDSGNSSPVSPVHFQDHVHPQQE QRDQQHLQHHHGAHNPHNLYAGRLHMMSAGIAV >KAG8212624.1 hypothetical protein J437_LFUL013907 [Ladona fulva] MAVVDSHVVELREIFQDFSTKISRHVSEKSSLNLEELQKLLDELIVFTRNVPNDAVIYPDYDIILTSLGSIVSVHKLDLL VKSCQFMCYLVGLHNVKLRKEHIERMFNLCLQGLRVINSSTDILHVFNAMETLLQADQNDTLEKFNILTNLASPKNGILI QMLSDKETSGPLLLAAVGCLELLLSPPSLSGYSDASVEKQIKMDEICETCMQTLISILGRGKPEDLDDLGYCKLIVAAMR GIHHILAPAIRASETSKILTPSGRLGEVVGIITAFMGLGLNDRQGSIKYPVGPLKANMSSHIMPVVPQELEEGKDGYKGR TTKVSDAAFD >KAG8212625.1 hypothetical protein J437_LFUL013908, partial [Ladona fulva] MPQRSIHPALNSVRLEPDDPKLPSWQMTSDSDMSSSDVESVKVKDSEGRTAFSKVRQMSCSLLLCVIKVTQPSVLFAFWP SLLPDGMPTGPGHLLPIPLKVGDQVTLATLMLHDPASKGRALAAMVLAALLTSWQRFLTEAECS >KAG8212626.1 hypothetical protein J437_LFUL013909, partial [Ladona fulva] VLSSIARNQELAPKLLLHSDFWPLLQTRLIIGPGNLHESVDISSLKYHWGKFWESLGLAIRRCVELKGEPVLTHSQAVAF WQAFISGTSLVPLIQDMNNVSLRVVGCDVLATVGETVFGQIM >KAG8212627.1 hypothetical protein J437_LFUL013910 [Ladona fulva] MLLSGDHIAAVDADPTLLDRLITGDITWCYLNDPQSKRQSMVWKSLSSPWPKKFRADGSRGKVMLVVFFNCKEIVHYELV PEGCTVNKELHVTIFKWLRKAVCWKRPDLWQQKFWVLHHDNAPIHRSLLVTQFLDKHDILTLPQPPYSTDLIPCEFFLFH RFKSHLKGRRYTDSEAEQTAATRTLTEVAKTGL >KAG8212628.1 hypothetical protein J437_LFUL013911 [Ladona fulva] MRMSQFEQRSIVRFCVLLGKMFVQTFELIKQAYGDAALGQTAVYNWQSLKDNQRSGWPSTACNDEIIAQVRDIILADSRQ TVADVAGLANISIGSCHAILHDD >KAG8212629.1 hypothetical protein J437_LFUL013912 [Ladona fulva] MDLHFLLDTADTLQSALESDASRGEVWVKASWALGNLTDAFILNKEEGLADAVPDGPLLELLETCASACQKLPKGGNSAD RVRCNAVRAAGNIVRLIDFRGWDEMAGNMSLFSLGKRGKDAVEKIVFTLVDAATKSCDMKVRWNACYAISGLLKNSTLYD NSCAYDDLVTKIVLTLCHLAKLVEKGDLVLLGEIIDPYLENTQSQMISRSHSLVPEKASFIGEAALCLAAFRKNDAASLT RIEDECLSKLIKIFSPDNSKKFSGVYPF >KAG8212630.1 hypothetical protein J437_LFUL013913 [Ladona fulva] MEDENNDDLDEKGKPIVAKSAYDLQRLKLEKLMKNPEKPIPIPERPKGKNLPPTPDFVRNVMGSSAGAGSGEFHVYRHLR RKEYARQKFIQEKGVKETLEEQYHRKIEMNRIEAEERTAKKRAKRLKKKQKSKKPKPSGDKQETKEAEDSSSDSKDEADD >KAG8212631.1 hypothetical protein J437_LFUL013914 [Ladona fulva] MADLEAVLADVSYLMAMEKSKCTPAARASKKIILPDPRVISLPNYAKNVAIYHWMPITVMRVHKL >KAG8212632.1 hypothetical protein J437_LFUL017211, partial [Ladona fulva] NGGWSPWSQWSECSARCGRGVQKRSRLCTHPAPLHGGLPCQGSATQKVDCTTMCPAVDGRWSGWSAWSTCGPDCRHHRRR TCNSPAPANGGKYCQGRDHATANCSDGMCRLSDSTSSTSSSSSSPVSSGGSGGGNSGEFQPPFGIVYLPLKIISFVW >KAG8212633.1 hypothetical protein J437_LFUL018167 [Ladona fulva] MEYIHHVATEKIILPPKISPVFGKKTFSKAIVEPAQYVEDIELNSASPEESKEDESIEDFVRSVLRDRIHGTLPILQQRD RRCSKLGNVAGGDWKSWTEL >KAG8212634.1 hypothetical protein J437_LFUL018672 [Ladona fulva] MIFCLIVQQSPVGGGSPLVGGGGAGPRDAHETGSTHDETSSSGNKEDEEDDDDMFVRLFVDENLDRMVPISKQPKEKIQA IIDSCTRQFPEFAERARKRIRTYLKSCRRNKRSRDSNGVWDATRPTPAHLTSVQAEQILAQACENESQNAKRMRLGLEPV SQPMPILPTDRTMDLYSIAPSLVDKKSDIVMSDCNAATVTTTATTPSSSSTSSSSAPSPPTLIATTSSIAITTASTGVGP SPSPSPSSATPILPSSAITTTSSAHHPHHPHHPHLPIHASQAHLAHIAVTSTTSPAPLAISSSPTAVAAIPFNKTMGSLA DAKASVPLTTAATLNGSVTAATGLASQPAPSTLYRPNFTQAFQRSTAVGGGVGSNGGPNPGAPVPSATGTYPGPLFPSSQ FGPGGMIGNGTGPTDLSMKSKPLLSHKLNSAEMAAVKQLITGYRESAAFLLRSADELEQLLLQQQ